A reader sent in a link to this online book, and it looks interesting: A History of the Warfare of Science with Theology in Christendom. It looks very comprehensive (at least up to the late 1800′s).
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It’s a classic!
Haven’t read it, but Gould thought its history was rather Whiggish.
White’s work has been debunked my modern historians. For a more recent introduction, see Wikipedia:
http://en.wikipedia.org/wiki/Conflict_thesis
That wikipedia article was written by an apologist who thinks science and theology have gotten along just fine. The only debunkers are Templeton Prize candidates.
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